According to a long-standing hypothesis, membrane pumps function by fl
ip-flopping between two protein conformations that allow alternative a
ccess of the ion binding site to the two membrane surfaces. Site-speci
fic mutagenesis, time-resolved spectroscopy and X-ray diffraction conf
irm this mechanism for bacteriorhodopsin, and implicate change of elec
trostatic interaction at the active site as the trigger for the global
protein conformation change during the proton transport cycle.