The association between HLA sharing and recurrent spontaneous abortion
(RSA) was tested in 123 couples and the association between HLA shari
ng, and the outcome of treatment for unexplained infertility by in vit
ro fertilization (IVF) was tested in 76 couples, by using a new shared
-allele test in order to identify more precisely the region of the maj
or histocompatibility complex (MHC) influencing these reproductive def
ects. The shared-allele test circumvents the problem of rare alleles a
t HLA loci and at the same time provides a substantial gain in power o
ver the simple chi(2) test. Two statistical methods, a corrected homog
eneity test and a bootstrap approach, were developed to compare the al
lele frequencies at each of the HLA-A, HLA-B, HLA-DR, and HLA-DQ loci;
they were not statistically different among the three patient groups
and the control group. There was a significant excess of HLA-DR sharin
g in couples with RSA and a significant excess of HLA-DQ sharing in co
uples with unexplained infertility who failed treatment by IVF. These
findings indicate that genes located in different parts of the class I
I region of the MHC affect different aspects of reproduction and stron
gly suggest that the sharing of HLA antigens per se is not the mechani
sm involved in the reproductive defects. The segment of the MHC that h
as genes affecting reproduction also has genes associated with differe
nt autoimmune diseases, and this juxtaposition may explain the associa
tion between reproductive defects and autoimmune diseases.