Jt. Juuti et Dh. Bamford, RNA-BINDING, PACKAGING AND POLYMERASE ACTIVITIES OF THE DIFFERENT INCOMPLETE POLYMERASE COMPLEX PARTICLES OF DSRNA BACTERIOPHAGE-PHI-6, Journal of Molecular Biology, 249(3), 1995, pp. 545-554
phi 6 is an enveloped dsRNA bacterial virus. Its segmented genome resi
des inside the virion associated polymerase complex which is formed by
four proteins (P1, P2, P4 and P7) encoded by the viral L segment. Com
plete and incomplete polymerase complex particles can be produced usin
g cDNA copies of this largest genome segment. We have analysed the cap
acity of the different purified particles to (1) package phi 6 (+) sen
se genomic precursors and unspecific RNA, (2) synthesize (-) and (+) s
trands and (3) bind phi 6 specific and unspecific RNAs. Both (-) and (
+) strand synthesis polymerase activities were found to be associated
with protein P2. In addition to complete particles, particles lacking
protein P2 were found to package and protect genomic precursor ssRNAs.
Protein P7 was needed for efficient packaging. Regulation and specifi
city of the packaging were found to be independent of P2. Particles co
mposed of proteins P1 and P4 did not package or protect RNA but did bi
nd phi 6 genomic (+) strand RNAs. The three phi 6 (+) strands bound in
equal amounts to the particles when tested alone in a filter binding
assay. In competition experiments they competed each other for binding
, indicating that individual binding sites for the three genomic (+) s
trands do not exist. Differences in RNA binding competition among the
four particles were observed, suggesting that packaging specificity is
achieved by complex interactions of proteins and genomic (+) strand R
NAs during the advancement of the packaging process after the initial
binding events.