The response of a linear time-invariant process on a stochastic input
signal is characterized by the transfer function, Unknown past inputs
and future output are sources of inaccuracy in relating a finite segme
nt of an output signal via an estimated transfer function to the corre
sponding input segment, These end effects are usually characterized wi
th error bounds on the Fourier transform of the output signal, but the
error in an estimated transfer function can be quantified more precis
ely in terms of bias and variance. The accuracy of three transfer func
tion estimators is compared, showing an infinite variance for the Expe
rimental Transfer Function Estimate (ETFE) and a better efficiency for
the estimators which are based on the cross spectrum. The variance du
e to additive noise depends on whether the input is a stochastic or a
deterministic signal.