Two plasmid-carried restriction-modification (R-M) systems, EcoRI (fro
m pMB1 of Escherichia coli) and Bsp6I (from pXH13 of Bacillus sp. stra
in RFL6), enhance plasmid segregational stability in E. cell and Bacil
lus subtilis, respectively. Inactivation of the endonuclease or the pr
esence of the methylase in trans abolish the stabilizing activity of t
he R-M systems. We propose that R-M systems mediate plasmid segregatio
nal stability by postsegregational killing of plasmid-free cells. Plas
mid-encoded methyltransferase modifies host DNA and thus prevents its
digestion by the restriction endonuclease. Plasmid loss entails degrad
ation and/or dilution of the methylase during cell growth and appearan
ce of unmethylated sites in the chromosome. Double-strand breaks, intr
oduced at these sites by the endonuclease, eventually cause the death
of the plasmid-free cells. Contribution to plasmid stability is a prev
iously unrecognized biological role of the R-M systems.