The imperfect yeast Candida maltosa has an ill-defined genetic constit
ution; it is nominally diploid, but probably highly aneuploid, in natu
re. We report on polymorphisms specifically affecting those chromosome
s which bear the cm-ADE1 gene. This gene encodes phosphoribosylaminoim
idazole-succino-carboxamide synthetase, an enzyme in the adenine biosy
nthetic pathway. By electrophoretic karyotype analysis, three differen
tly sized chromosomes were demonstrated to carry cm-ADE1; the size (bu
t not the number) of these chromosomes was also found to vary, both be
tween strains and during the mitotic growth of a single strain. Four d
ifferent alleles of cm-ADE1 have been cloned and sequenced from one pr
ototrophic strain. DNA sequence divergence between these different all
eles is as high as 8%, with the greatest divergence being found in the
upstream region. Mitotic recombination events that led to changes in
the karyotype were followed by using cm-ADE1 DNA as an hybridization p
robe. A recombination hot-spot in the neighbourhood of the gene appear
s to be responsible for the instability of the chromosomes on which it
resides.