COMBINED MICROBIAL COMMUNITY-LEVEL ANALYSES FOR QUALITY ASSURANCE OF TERRESTRIAL SUBSURFACE CORES

Citation
Rm. Lehman et al., COMBINED MICROBIAL COMMUNITY-LEVEL ANALYSES FOR QUALITY ASSURANCE OF TERRESTRIAL SUBSURFACE CORES, Journal of microbiological methods, 22(3), 1995, pp. 263-281
Citations number
38
Categorie Soggetti
Microbiology,"Biochemical Research Methods
ISSN journal
01677012
Volume
22
Issue
3
Year of publication
1995
Pages
263 - 281
Database
ISI
SICI code
0167-7012(1995)22:3<263:CMCAFQ>2.0.ZU;2-6
Abstract
Bacterial communities from surface soils, groundwater, drilling muds a nd deep subsurface cores were profiled by sole carbon source utilizati on and by phospholipid ester-linked fatty acid analysis. The combinati on of these functional and structural methods successfully distinguish ed communities from disparate origins. Multivariate analysis of the da ta showed good agreement between the results of the two methods. Subsu rface communities tended to respire amino acids over carbohydrates and demonstrated preferential use of individual compounds such as acetate and Tween as sole carbon sources. PLFA profiles indicated that the gr oundwaters predominately contained gram negative aerobic heterotrophic populations, the drilling muds and cuttings were populated by gram ne gative anaerobes and the core communities were composed of anaerobic g ram negative bacteria and gram positive bacteria. The utility of this approach as a component of quality assurance of core samples obtained for microbiological analysis during mud rotary coring was demonstrated . Monitoring of controlled bioprocesses, environmental remediation and detection of environmental disturbance are some of the numerous poten tial applications for these community-level characterization methods. Since combined analyses such as these can simultaneously provide speci fic information about individual community members and about community -level function, it is hoped that these methods will prove useful in a nswering fundamental questions in microbial ecology, such as the relat ionship between in situ community structure and its measurable functio n.