The Drosophila apterous gene encodes a LIM homeodomain protein express
ed embryonically in a small subset of differentiating neurons. To esta
blish the identity of these neurons and to study the role of apterous
in their development, we made apterous promoter fusions to an axon-tar
geted reporter gene. We found that all apterous-expressing neurons are
interneurons that choose a single pathway within the developing centr
al nervous system. In apterous mutants, these neurons choose incorrect
pathways and fail to fasciculate with one another. Our results indica
te that apterous functions to control neuronal pathway selection and s
uggest that other vertebrate and invertebrate members of the LIM homeo
domain class of proteins may serve similar functions.