Six microsatellite loci were characterized in Dioscorea tokoro, a wild
yam species in East Asia. All six loci were polymorphic in a sample o
f 23 individuals from natural populations in Japan. The microsatellite
loci displayed many alleles (6.2 alleles per locus on average), and t
he observed heterozygosity (H-o = 0.54) as well as expected heterozygo
sity (H-e = 0.68) were high. The heterozygosities were far more than t
hat previously detected by allozyme analysis of D. tokoro (H-o = 0.23,
H-e = 0.28). Five microsatellite loci were sufficient to provide a pa
ternity exclusion rate (Q) of Q = 0.98, which enables monitoring of th
e pollen-mediated gene flow between plants in a population. Microsatel
lite loci are abundant and highly polymorphic in D. tokoro and other p
lants and are therefore ideal markers for plant population genetic stu
dies.