THE AGREEMENT METRIC FOR LABELED BINARY-TREES

Citation
W. Goddard et al., THE AGREEMENT METRIC FOR LABELED BINARY-TREES, Mathematical biosciences, 123(2), 1994, pp. 215-226
Citations number
12
Categorie Soggetti
Mathematical Methods, Biology & Medicine","Mathematics, Miscellaneous","Biology Miscellaneous
Journal title
ISSN journal
00255564
Volume
123
Issue
2
Year of publication
1994
Pages
215 - 226
Database
ISI
SICI code
0025-5564(1994)123:2<215:TAMFLB>2.0.ZU;2-W
Abstract
Let S be a set of n objects. A binary tree of S is a binary tree whose leaves are labeled without repetition from S. The operation of prunin g a tree T is that of removing some leaves from T and suppressing all inner vertices of degree 2 which are formed by this deletion. Given tw o trees T and U, an agreement tree is a tree that can be obtained from T as well as from U by pruning the fewest number of leaves from the t wo trees. A quadratic algorithm is presented for doing this and two me trics are defined based on agreement trees.