The minus strand of hepatitis A virus can be detected specifically by
reverse transcription and polymerase chain reaction amplification in i
nfected cell culture extracts. Several controls gave evidence that the
amplified fragment actually used the minus strand as initial template
. Non-thermostable reverse transcriptase was not efficient for this pu
rpose because of self-priming of the positive-stranded viral RNA durin
g the reverse transcription step. This problem was overcome by the use
of the thermostable rTth DNA polymerase that also has reverse transcr
iptase activity in the presence of Mn2+.