PULSED-FIELD GEL ELECTROPHORESIS-FINGERPRINTING, GENOME SIZE ESTIMATION AND RRN LOCI NUMBER OF RHIZOBIUM-GALEGAE

Citation
I. Huber et S. Selenskapobell, PULSED-FIELD GEL ELECTROPHORESIS-FINGERPRINTING, GENOME SIZE ESTIMATION AND RRN LOCI NUMBER OF RHIZOBIUM-GALEGAE, Journal of Applied Bacteriology, 77(5), 1994, pp. 528-533
Citations number
21
Categorie Soggetti
Microbiology,"Biothechnology & Applied Migrobiology
ISSN journal
00218847
Volume
77
Issue
5
Year of publication
1994
Pages
528 - 533
Database
ISI
SICI code
0021-8847(1994)77:5<528:PGEGSE>2.0.ZU;2-#
Abstract
The genomes of several Rhizobium galegae (of.) strains, which effectiv ely nodulate Galega officinalis host, were analysed by pulsed-field ge l electrophoresis (PFGE). Individual PFGE-fingerprints were obtained f or every particular strain when the rarely cutting restriction endonuc leases SpeI and AsnI were applied. In hybridization experiments, where a DNA fragment carrying the rrnB ribosomal RNA operon of Escherichia coli was used as a probe, the number of the resulting strain-specific SpeI and AsnI bands was reduced to three for all of the strains studie d. This suggests that in Rh. galegae (of.) there are at least three rr n loci. On the basis of the lengths of the SpeI fragments, separated b y PFGE, the genome size of five Rh. galegae (of.) strains was estimate d to be 5852 +/- 198 kbp.