The initial report of T cell receptor (TCR) V beta-specific thymic sel
ection in mice showed association with expression of H-2E molecules an
d affected V beta 17(a) T cells which were present in CD4(+)8(+) doubl
e positive thymocytes but deleted from the CD4(+) and CD8(+) single po
sitive populations. Similar deletions were subsequently reported for V
beta 8.1(+) and V beta 6(+) T cells in Mls-l(a) mouse strains and for
V beta 3(+) T cells in Mls-2(a)/3(a) strains. The 'Mls antigens' are
most effectively presented by H-2E molecules but certain alleles of H-
2A molecules can also present these endogenous superantigens. Expressi
on of Mls antigens can cause both V beta-specific thymic deletion and
stimulation of peripheral T cells from Mls-negative strains. Another c
ategory of 'Mls-like' antigens cause only V beta-specific thymic delet
ion in H-2E(+) strains, affecting V beta 5(+) and V beta 11(+) T cells
. The non-MHC ligands responsible for each of these effects are supera
ntigens analogous to the exogenous bacterial superantigens, which also
show TCR V beta-specific stimulatory effects when presented by MHC cl
ass II positive antigen-presenting cells. The genes encoding endogenou
s superantigens in mice were shown to co-segregate with mouse mammary
tumour virus integrations (Mtv) and to be the Mtv-LTR orf genes. In vi
tro translation of Mtv-LTR orf genes identified their products as type
II integral membrane glycoproteins with the polymorphic C terminus ou
tside the cell. These polymorphisms correlate with specificity for the
different TCR V beta chains. Virtually all TCR V beta-specific negati
ve selection in the mouse thymus can be accounted for by the expressio
n of Mtv or MMTV (the infectious counterparts of Mtv proviral integran
ts) LTR-orf proteins, presented with H-2E or certain H-2A alleles. It
is unlikely that TCR V beta-specific positive selection is due to endo
genous superantigens since it does not segegrate with Mtv genomes. In
humans, HLA-DR molecules appear to be homologous with H-2E in mice whe
reas HLA-DQ are the homologues of H-2A. H-2E negative mice transgenic
for HLA-DR alpha chain express a mouse/human heterodimeric molecule wh
ich presents Mtv superantigens causing TCR VP-specific deletion. Such
trans-species class II molecules are also effective in TCR V beta-spec
ific positive selection of V beta 2(+), V beta 6(+) and V beta 10(+) T
cells. Taken together, these results show that human MHC class II mol
ecules can interact with the murine T cell repertoire. In vivo effects
of the expression of endogenous superantigens with DR alpha transgene
s can differ from those with mouse H-2E alpha transgenes. A particular
ly interesting example is the effect on susceptibility to the induced
autoimmune disease experimental allergic encephalomyelitis.