The ultimate goal in protein design is to elucidate the fundamental pr
inciples that determine structure. With increased understanding of the
molecular basis underlying the sequence-structure relationship may co
me the ability to control it and, thereby, to generate proteins with d
esired specifications. Channel proteins, which mediate cell signaling,
are ideally suitable for protein design. Plausible molecular blueprin
ts for the pore-forming structure are bundles of amphipathic alpha-hel
ices or beta-barrels that cluster together to generate a hydrophilic c
hannel. This review focuses on the progress achieved to produce such d
esigns and on the approximation of the synthetic channels to the targe
ted biological function.