We describe here the generation of gene disruption constructs using PC
R amplification of selectable markers with primers that provide homolo
gy to the target gene of interest. We find that regions of homology as
short as 38 to 50 bp suffice to mediate homologous recombination in y
east. We describe applications of this technology to three specific ye
ast genes that would have been difficult to disrupt with current metho
ds. By dispensing with the need to either clone the gene of interest o
r engineer a standard disruption construct, this method should facilit
ate analysis of sequenced genes of unknown function, which will soon i
nclude the entire yeast genome.