D. Grattapaglia et al., GENETIC-MAPPING OF QTLS CONTROLLING VEGETATIVE PROPAGATION IN EUCALYPTUS-GRANDIS AND E-UROPHYLLA USING A PSEUDO-TESTCROSS STRATEGY AND RAPDMARKERS, Theoretical and Applied Genetics, 90(7-8), 1995, pp. 933-947
We have extended the combined use of the ''pseudo-testcross'' mapping
strategy and RAPD markers to map quantitative trait loci (QTLs) contro
lling traits related to vegetative propagation in Eucalyptus. QTL anal
yses were performed using two different interval mapping approaches, M
APMAKER-QTL (maximum likelihood) and QTL-STAT (non-linear least square
s). A total of ten QTLs were detected for micropropagation response (m
easured as fresh weight of shoots, FWS), six for stump sprouting abili
ty (measured as # stump sprout cuttings, #Cutt) and four for rooting a
bility (measured as % rooting of cuttings, %Root). With the exception
of three QTLs, both interval-mapping methods yielded similar results i
n terms of QTL detection. Discrepancies in the most likely QTL locatio
n were observed between the two methods. In 75% of the cases the most
likely position was in the same, or in an adjacent, interval. Standard
ized gene substitution effects for the QTLs detected were typically be
tween 0.46 and 2.1 phenotypic standard deviations (sigma p), while dif
ferences between the family mean and the favorable QTL genotype were b
etween 0.25 and 1.07 sigma p. Multipoint estimates of the total geneti
c variation explained by the QTLs (89.0% for FWS, 67.1% for #Cutt, 62.
7% for %Root) indicate that a large proportion of the variation in the
se traits is controlled by a relatively small number of major-effect Q
TLs. In this cross, E. grandis is responsible for most of the inherite
d variation in the ability to form shoots, while E. urophylla contribu
tes most of the ability in rooting. QTL mapping in the pseudo-testcros
s configuration relies on within-family linkage disequilibrium to esta
blish marker/trait associations. With this approach QTL analysis is po
ssible in any available full-sib family generated from undomesticated
and highly heterozygous organisms such as forest trees. QTL mapping on
two-generation pedigrees opens the possibility of using already exist
ing families in retrospective QTL analyses to gather the quantitative
data necessary for marker-assisted tree breeding.