Ls. Hansen et Th. Blackburn, AMINO-ACID DEGRADATION BY SULFATE-REDUCING BACTERIA - EVALUATION OF 4METHODS, Limnology and oceanography, 40(3), 1995, pp. 502-510
Four methods were evaluated for estimating the proportion of dissolved
free amino acids (DFAAs) metabolized by sulfate-reducing bacteria (SR
B). Our main aim was to assess the problems associated with each metho
d, each of which used molybdate (Mo) as an inhibitor of SRB activity.
Mo had some side effects that clouded interpretation of the results. M
o treatment did not increase the accumulation rate of protein amino ac
ids, but the nonprotein amino acids [delta-amino-valeric-acid (delta-A
VA), gamma-amino-butyric-acid (GABA), beta-amino-glutaric-acid (BAGA),
and unidentified amines] accumulated, resulting in a total amino pool
increase of 6.1 nmol cm(-3) d(-1). There was no decrease in NH,+ prod
uction rate. SRB appeared to degrade C-14-labeled aspartic acid, serin
e, glutamic acid, and alanine and were also involved in the degradatio
n of delta-AVA, BAGA, GABA, and taurine. Mo appeared to release DFAAs
which were either bound to sediment particles or were from killed SRB.
These additional DFAAs complicated comparisons between incubations wi
th and without Mo. We suggest that in the case of Mo-amended incubatio
ns, surplus DFAAs were metabolized by fermenting bacteria, resulting i
n no accumulation of protein DFAA and an increased NH4+ production rat
e. The uninhibited rate of NH4+ production (111 nmol cm(-3) d(-1)) ind
icated that SRB were responsible for similar to 5% of this rate.