Recombination of an insertion vector into its chromosomal homologue is
a conservative event in that both the chromosomal and the vector sequ
ences are preserved. However, gene conversion may accompany homologous
recombination of an insertion vector, To examine gene conversion in m
ore detail we have determined the targeting frequencies and the struct
ure of the recombinant alleles generated with a series of vectors whic
h target the hprt gene in embryonic stem cells, We demonstrate that ge
ne conversion of the introduced mutation does not significantly limit
homologous recombination and that gene conversion occurs without a seq
uence specific bias for five different mutations. The frequency of the
loss of a vector mutation and the gain of a chromosomal sequence is i
nversely proportional to the distance between the vector mutation and
the double-strand break. The loss of a chromosomal sequence and the ga
in of a vector mutation occurs at a low frequency.