Genetic subdivision in local populations of the European house mite, M
us musculus domesticus and M. m. musculus, was analysed to study patte
rns of gene flow. The data consisted of frequencies of microsatellite
alleles in 16 samples (250 individuals) from a total of II sites in Ju
tland, which included successive samples from three sites. Sequences o
f the control region of mitochondrial DNA in three successive samples
from one site were also analysed. Microsatellite genotype frequencies
within samples were close to Hardy-Weinberg expectations. Levels of mi
crosatellite differentiation among samples (theta = 0.50-0.21) corresp
onded to limited gene flow at migration-drift equilibrium (N-m = 1-5).
Weak isolation by distance for microsatellites in M. m. musculus sugg
ested that gene flow tends to occur among neighbouring sites. Estimate
s of effective population size over a few generations were much lower
than those corresponding to the long periods needed for arrival at mut
ation-drift equilibrium. This suggested that subpopulations had been i
nfluenced by gene flow since formation, or had originated recently fro
m genetically diverse founders.