S. Janecek et A. Bateman, THE PARALLEL (ALPHA BETA)(8)-BARREL - PERHAPS THE MOST UNIVERSAL AND THE MOST PUZZLING PROTEIN-FOLDING MOTIF/, BIOLOGIA, 51(6), 1996, pp. 613-628
The presented review deals with the family of proteins adopting the (a
lpha/beta)(8)-barrel structural fold. Special emphasis is given to the
groups of (alpha/beta)(8)-barrel enzymes for which there is good evid
ence of evolutionary divergence from a common ancestor, firstly from s
equence homology, such as starch hydrolases and related enzymes and fl
avin oxidase/dehydrogenase enzymes, and secondly from functional and s
tructural data, such as enzymes involved in tryptophan biosynthesis. T
he presence of a common phosphate binding site in at least twelve diff
erent (alpha/beta)(8)-barrel enzymes is reviewed. Two other groups of
(alpha/beta)(8)-barrel are described, the so-called transition metal b
inding superfamily and the 4/7 superfamily. Finally, recent work using
so-called ''hidden homologies'' is discussed which may suggest that a
significant proportion of (alpha/beta)(8)-barrels may be diverged fro
m a very distant common ancestor. In general, however, the question of
evolution of these enzymes still remains open.