DNA topoisomerases are enzymes that regulate DNA topology and are esse
ntial for the integrity of the genetic material during transcription,
replication and recombination processes. Inhibitors of the mammalian e
nzymes are widely used antitumor drugs. They stabilize topoisomerase-D
NA cleavable complexes by hindering the DNA relegating step of the cat
alytic reaction, thus resulting in DNA cleavage stimulation. Investiga
tions on the sequence selectivity of DNA cleavage stimulated by chemic
ally unrelated compounds established that specific nucleotides flankin
g strand cuts are required for drug action. Moreover, structure-activi
ty relationship studies have identified structural determinants of dru
g sequence specificities, thus eventually allowing the design of new a
gents targeted at selected genomic regions. The initial cellular lesio
n, i.e., the drug-stabilized cleavable complex, is a reversible molecu
lar event; however, how it may lead to cell death remains to be fully
clarified. Several laboratories focused in past years on molecular and
genetic aspects of drug-activated apoptosis. Irreversible double-stra
nded DNA breaks, generated from collisions between cleavable complexes
and advancing replication forks, were suggested to increase p53 prote
in levels, thus triggering the cell death program. Other genes were al
so shown to cooperate in modulating the cell response to drug treatmen
ts. Recently, several groups have evaluated the possible prognostic va
lue of topoisomerase II levels in solid tumors and hematopoietic neopl
asms. Topoisomerase II inhibitors may also have genotoxic effects. Sec
ondary leukemias, characterized by a translocation between chromosomes
11 and 9, have been reported in disease-free patients after treatment
s with drug regimens that included antitopoisomerase II agents. It has
been proposed that an impairment of topoisomerase activity may be inv
olved in the molecular pathogenesis of secondary leukemias.