Bh. Lee et al., DOMAIN CLOSURE IN THE CATALYTIC CHAINS OF ESCHERICHIA-COLI ASPARTATE TRANSCARBAMOYLASE INFLUENCES THE KINETIC MECHANISM, The Journal of biological chemistry, 270(26), 1995, pp. 15620-15627
The closure of the two domains of the catalytic chains of Escherichia
coli aspartate transcarbamoylase, which is critical for completion of
the T --> R transition, is stabilized by salt-bridges between Glu-50 a
nd both Arg-167 and Arg-234. Mutation of Glu-50 to Ala shifts the enzy
me toward a low activity, low affinity state (Newton, C. J., and Kantr
owitz, E. R. (1990) Biochemistry, 29, 1444-1451), Kinetic isotope effe
cts (KIE) and equilibrium isotope exchange kinetics (EIEK) have been u
sed to probe the dynamic properties of the Glu-50 --> Ala enzyme. Unli
ke the behavior of the wild-type enzyme, the observed kinetic isotope
effect for C-13 versus C-12 at the carbonyl group of carbamoyl phospha
te (CP) increased upon the binding of ligands which promote the format
ion of the R-state (Asp, N-phosphonacetyl-L-aspartate (PALA), or ATP).
The maximum rate for the [C-14]Asp reversible arrow Carbamoyl asparta
te (CAsp) exchange with the Glu-50 --> Ala enzyme was 500-fold slower
than for the wild-type enzyme; however, the rate for the [C-14]Cp reve
rsible arrow CAsp exchange was only 50-fold slower, reversing the rela
tive rates observed with the wild-type enzyme. In addition, upon varia
tion of substrate pairs involving Asp or CAsp, loss of inhibition effe
cts in the CP reversible arrow CAsp exchange indicated that the Glu-50
--> Ala substitution caused the kinetic mechanism for the mutant enzy
me to shift from ordered to random. Computer simulations of the EIEK d
ata indicate that the Glu-50 --> Ala mutation specifically causes stro
ng decreases in the rates of catalysis and association-dissociation fo
r Asp and CAsp, with minimal effects on the GP and P-i on-off rates, W
ith substrates bound, the Glu-50 --> Ala enzyme apparently does not at
tain a full R-state conformation. The PALA-activated Glu-50 --> Ala en
zyme, however, exhibits substrate affinities comparable to those for t
he wild-type enzyme, but fails to restore the preferred order substrat
e binding. Unlike the wild-type enzyme, both the T and R-states of the
Glu-50 --> Ala enzyme contribute to catalysis. A third state, I, is p
roposed for the Glu-50 --> Ala enzyme, in which random order substrate
binding is exhibited, and the catalytic step contributes significantl
y to overall rate limitation.