The arbuscular mycorrhizal (AM) association between fungi in the order
Glomales and the roots of a very wide range of vascular plants is of
global ecological significance but has proved particularly intractable
to study in the field. We have developed a reliable technique to iden
tify the fungal symbionts in roots taken directly from natural communi
ties. Selective Enrichment of Amplified DNA combines the use of recent
ly-developed specific DNA primers with a novel method based on the pri
nciple of subtractive hybridization to remove interfering plant-derive
d DNA after amplification with the polymerase chain reaction. Using th
is technique we have shown that endomycorrhizas of bluebells (Hyacinrh
oides non-scripta) sampled directly from a woodland habitat are multis
pecies communities of varying composition which contain at least three
genera of mycorrhizal fungi. The technique works well on a range of p
lant species and should have wide application to the identification of
other symbionts, including pathogens. A spore survey has indicated th
at two particular AM types are associated with bluebells and this obse
rvation corroborates the molecular data. The presence of a Glomus spec
ies in bluebell roots was not expected from the spore data.