V. Bhattacherjee et al., USE OF NS-4 PEPTIDES TO IDENTIFY TYPE-SPECIFIC ANTIBODY TO HEPATITIS-C VIRUS GENOTYPE-1, GENOTYPE-2, GENOTYPE-3, GENOTYPE-4, GENOTYPE-5 ANDGENOTYPE-6, Journal of General Virology, 76, 1995, pp. 1737-1748
The 5' end of the NS-4 protein of different genotypes of hepatitis C v
irus (HCV) is highly variable in nucleotide and inferred amino acid se
quence, with frequent predicted amino acid substitutions between all s
ix of the major HCV genotypes described to date. This region has been
shown to be antigenic by epitope mapping, and elicits antibody in HCV-
infected individuals with a detectable type-specific component. We hav
e used this sequence data to specify branched peptides for an indirect
binding/competition assay to detect type-specific antibody to each ma
jor genotype. A total of 183 out of 210 samples (87%) from blood donor
s and patients with chronic hepatitis C infected with genotypes 1 to 6
showed detectable type-specific antibody to NS-4 peptides that in alm
ost all cases (> 97%) corresponded to the genotype detected by a PCR t
yping method. These findings demonstrate the existence of major antige
nic differences between genotypes of HCV, and indicate how infection w
ith different variants of HCV may be detected by a serological test.