Alterations of the long arm of chromosome 1 are the most frequent cyto
genetic abnormalities found in human breast carcinoma. We examined gen
etic alterations on chromosome 1q in 124 human breast tumors, using re
striction fragment length polymorphism markers mapping to the long arm
(13 markers) and short arm (4 markers). Imbalance of heterozygosity a
t one or more loci on the long arm was observed in 80 (65%) of the 124
tumors, Among these 80 tumor DNAs, 38 showed an allele gain, 16 a los
s of heterozygosity, and 1 both allele gain and loss of heterozygosity
at each locus on the long arm, indicating that 55 tumor DNAs had a ga
in and/or loss of the entire long arm of chromosome 1. Detailed altera
tion mapping of the other 25 tumors showing partial alterations of chr
omosome Iq identified two distinct altered regions: a smallest common
deleted region at 1q21-31 and a smallest common overrepresented region
at 1q41-q44. The results suggest that both oncogenes and tumor suppre
ssor genes are present on chromosome Iq and are associated with breast
tumorigenesis.