In genetically modified plants, the introduced transgenes are sometime
s not expressed. They can be silenced. Transgenes can also cause the s
ilencing of endogenous plant genes if they are sufficiently homologous
, a phenomenon known as co-suppression. Silencing occurs transcription
ally and post-transcriptionally but silencing of endogenous genes seem
s predominantly post-transcriptional. If viral transgenes are introduc
ed and silenced, the posttranscriptional process also prevents homolog
ous RNA Viruses from accumulating; this is a means of generating virus
-resistant plants. A major goal of current research is to dissect the
mechanism(s) of these sequence-homology-dependent gene silencing pheno
mena. Various factors seem to play a role, including DNA methylation,
transgene copy number and the repetitiveness of the transgene insert,
transgene expression lever, possible production of aberrant RNAs, and
ectopic DNA-DNA interactions. The causal relationship between these fa
ctors and the link between transcriptional and post-transcriptional si
lencing is not always clear. In this review we discuss various observa
tions associated with gene silencing and attempt to relate them. (C) 1
997 Annals of Botany Company