A. Bencsura et al., ORIGINS AND DIVERSITY OF THE AGING REACTION IN PHOSPHONATE ADDUCTS OFSERINE HYDROLASE ENZYMES - WHAT CHARACTERISTICS OF THE ACTIVE-SITE DOTHEY PROBE, Biochemistry, 34(28), 1995, pp. 8989-8999
Molecular mechanics and dynamics combined with semiempirical calculati
ons were carried out for purposes of comparison of the active site cha
racteristics of AChE,(1) trypsin, and chymotrypsin as probed by their
diastereomeric adducts with 2-(3,3-dimethylbutyl) methylphosphonofluor
idate (soman), methylphosphonate monoester anions, and tetravalent car
bonyl intermediates of the reactions of the natural substrates in each
case. Glu199 is a key residue in the electrostatic catalytic mechanis
m of AChE, in removal of the leaving group, and possibly by acting as
an alternate general base catalyst. ''Pushing'' of an alkoxy ligand by
Glu199 and the numerous small van der Waals interactions promote deal
kylation in phosphonate adducts of AChE much more effectively than any
other enzyme. A high concentration of negative charge created by the
phosphonate ester monoanion and Glu199 adjacent to it fully accounts f
or the resistance to the attack of even the strongest nucleophile appl
ied for enzyme reactivation. Stabilization of the developing negative
charge on the phosphonates in the soman-inhibited PSCS adducts of seri
ne hydrolases is by electrophilic residues in the oxyanion hole (AChE)
and the protonated catalytic His, P-R diastereomers of soman-inhibite
d AChE can be accommodated in an orientation in which the oxyanion hol
e interactions are lost and for which the stabilizing interactions are
17-26 kcal/mol smaller than in the P-S diastereomer.(2) The dealkylat
ion reaction is almost equally likely in all diastereomers of soman-in
hibited AChE, The stabilizing interaction energies are similar to 4 kc
al/mol greater in the P-R than in the P-S adducts of the soman-inhibit
ed serine proteases, There is 0.60 unit greater partial negative charg
e on the phosphonyl fragment in the anion of phosphonate monoesters of
Ser than at the oxygens of tetravalent carbonyl transients resulting
in similar to 12-22 kcal/mol greater stabilization of the former than
the latter.