SEQUENCES PROMOTING THE TRANSCRIPTION OF THE HUMAN XA GENE OVERLAPPING P450C21A CORRECTLY PREDICT THE PRESENCE OF A NOVEL, ADRENAL-SPECIFIC, TRUNCATED FORM OF TENASCIN-X

Citation
Mk. Tee et al., SEQUENCES PROMOTING THE TRANSCRIPTION OF THE HUMAN XA GENE OVERLAPPING P450C21A CORRECTLY PREDICT THE PRESENCE OF A NOVEL, ADRENAL-SPECIFIC, TRUNCATED FORM OF TENASCIN-X, Genomics, 28(2), 1995, pp. 171-178
Citations number
39
Categorie Soggetti
Genetics & Heredity
Journal title
ISSN journal
08887543
Volume
28
Issue
2
Year of publication
1995
Pages
171 - 178
Database
ISI
SICI code
0888-7543(1995)28:2<171:SPTTOT>2.0.ZU;2-S
Abstract
A compact region in the human class III major histocompatibility locus contains the human genes for the fourth component of human complement (C4) and steroid 21-hydroxylase (P450c21) in one transcriptional orie ntation, while the gene for the extracellular matrix protein tenascin- X (TN-X) overlaps the last exon of P450c21 on the opposite strand of D NA in the opposite transcriptional orientation. This complex locus is duplicated into A and B loci, so that the organization is 5'-C4A-21A-X A-C4B-21B-XB-3'. Although this duplication event truncated the 65-kb X (B) gene to a 4.5-kb XA gene, the XA gene is transcriptionally active in the adrenal cortex. To examine the basis of the tissue-specific exp ression of XA and C4B, we cloned the 1763-bp region that lies between the cap sites for XA and C4B and analyzed its promoter activity in bot h the XA and the C4 orientations. Powerful, liver specific sequences l ie within the first 75 to 138 bp from the C4B cap site, and weaker ele ments lie within 128 bp of the XA cap site that function in both liver and adrenal cells. Because these 128 bp upstream from the XA cap site are perfectly preserved in the XB gene encoding TN-X, we sought to de termine whether a transcript similar to XA arises within the XB gene. RNase protection assays, cDNA cloning, and RT/PCR show that adrenal ce lls contain a novel transcript, termed short XB (XB-S), which has the same open reading frame as TN-X Cell-free translation and immunoblotti ng show that this transcript encodes a novel 74-kDa XB-S protein that is identical to the carboxy-terminal 673 residues of TN-X Because this protein consists solely of fibronectin type III repeats and a fibrino gen-like domain, it appears to correspond to an evolutionary precursor of the tenascin family of extracellular matrix proteins. (C) 1995 Aca demic Press, Inc.