Linkage studies of families ascertained through patients with juvenile
myoclonic epilepsy (JME) suggest that an HLA-linked susceptibility ge
ne on chromosome 6, designated ''EJM1,'' predisposes to a group of idi
opathic generalized epilepsies (IGEs) comprising JME, juvenile absence
epilepsy (JAE), childhood absence epilepsies (CAE), and epilepsies wi
th generalized tonic-clonic seizures (GTCS). To explore the EJM1-relat
ed phenotypic spectrum, we conducted linkage studies with HLA-DQ alpha
restriction fragment length polymorphisms in 44 families ascertained
through patients with CAE or JAE. Our results for the entire group of
families provide evidence against a major susceptibility locus for idi
opathic absence epilepsies and broader spectra of IGEs in the HLA regi
on. Lod scores less than -2 were obtained for a region from 10 cM up t
o 23 cM on either side of the HLA-DQ alpha locus, depending on the ass
umed trait model. Suggestive evidence for linkage was found only for a
subgroup of families with JME patients assuming an autosomal dominant
mode of inheritance with 70% penetrance. A maximum lod score was obta
ined when family members with JME, JAE, CAE, and idiopathic GTCS were
included into the affection status. Our results demonstrate that (1) t
he genetic susceptibility to idiopathic absence epilepsies and broader
spectra of IGEs is heterogeneous, (2) the gene effect of EJM1 depends
on the familial genetic background, and (3) EJM1 confers genetic susc
eptibility to idiopathic absence epilepsies and broader spectra of IGE
s in the presence of family members with JME.