Inquiring about the genetic barriers between different species amounts
to asking how populations become genetically isolated. The genetic ba
rrier which separates Salmonella typhimurium from Escherichia coli is
primarily recombinational. The structural component of this barrier is
genomic sequence divergence. The mismatch repair enzymes act as poten
t inhibitors of interspecies recombination, whereas the SOS system act
s as an inducible positive regulator. These genetic systems also contr
ol genomic stability in bacterial populations. The mismatch repair con
stitutively maintains genetic stability, while the SOS system is induc
ible and generates genetic variability. These opposing activities enab
le mismatch repair and SOS systems to determine both the rate of accum
ulation of sequence divergence and the extent of genetic isolation, wh
ich are the key components of the speciation process. This review pres
ents a compilation of present knowledge about mechanisms of gene trans
fer in bacteria, homologous recombination, the SOS system and the mism
atch repair system, all necessary for understanding the control of evo
lution of bacterial species.