DNA-BINDING SITE OF THE YEAST HETEROMERIC INO2P INO4P BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR - STRUCTURAL REQUIREMENTS AS DEFINED BY SATURATION MUTAGENESIS/
Hj. Schuller et al., DNA-BINDING SITE OF THE YEAST HETEROMERIC INO2P INO4P BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR - STRUCTURAL REQUIREMENTS AS DEFINED BY SATURATION MUTAGENESIS/, FEBS letters, 370(1-2), 1995, pp. 149-152
The inositol/choline-responsive element (ICRE) is an 11 bp cis-activat
ing sequence motif with central importance for the regulated expressio
n of phospholipid biosynthetic genes in the yeast Saccharomyces cerevi
siae. The ICRE containing the CANNTG core binding sequence (E-box) of
basic helix-loop-helix (bHLH) regulatory proteins is recognized by the
heteromeric bHLH transcription factor Ino2p/Ino4p, In this study, we
define the Ino2p/Ino4p consensus binding sequence (5'-WYTTCAYR-TGS-3')
based on the characterization of all possible single nucleotide subst
itutions. Interestingly, this analysis also identified a single functi
onal deviation (CACATTC) from the CANNTG core recognition element of b
HLH proteins, The DNA binding specificities of different yeast bHLH pr
oteins may now be explained by distinct nucleotide preferences especia
lly at two positions immediately preceding the CANNTG core motif.