We report the first molecular prenatal diagnosis of 3-hydroxy-3-methyl
glutaryl CoA lyase (HL) deficiency. The proband had a classic but seve
re presentation with hypoketotic hypoglycaemia and acidosis, secondary
mental retardation, and epilepsy, and HL deficiency was documented in
cultured fibroblasts. We found him to be homozygous for the frameshif
t mutation N46fs (+1), which yields a distinct pattern on single-stran
d conformation polymorphism (SSCP) analysis. In two subsequent pregnan
cies, molecular prenatal diagnosis was performed using SSCP. In the fi
rst, chorionic villus biopsy was normal. In the second pregnancy, amni
ocentesis revealed an affected fetus. In both pregnancies, the diagnos
is was confirmed enzymatically. HL activity was less than 7 per cent o
f control values in amniocytes and fetal liver of the affected pregnan
cy. In the second pregnancy, amniotic fluid metabolite measurements by
stable isotope dilution-selected ion monitoring mass spectrometry sho
wed greater than 100-fold increases of 3-hydroxy-3-methylglutaric acid
and of 3-methylglutaconic acid levels compared with controls.