Finger miller (Eleusine coracana), an allotetraploid cereal, is widely
cultivated in the arid and semiarid regions of the world. Three DNA m
arker techniques, restriction fragment length polymorphism (RFLP), ran
domly amplified polymorphic DNA (RAPD), and inter simple sequence repe
at amplification (ISSR), were employed ro analyze 22 accessions belong
ing to 5 species of Eleusine. An 8 probe - 3 enzyme RFLP combination,
18 RAPD primers, and 6 ISSR primers, respectively, revealed 14, 10, an
d 26% polymorphism in 17 accessions of E. corncana from Africa and Asi
a. These results indicated a very low level of DNA sequence variabilit
y in the finger millets but did allow each line to be distinguished. T
he different Eleusine species could be easily identified by DNA marker
technology and the 16% intraspecific polymorphism exhibited by the tw
o analyzed accessions of E. floccifolia suggested a much higher level
of diversity in this species than in E. coracana. Between species, E.
coracana and E. indica shared the most markers, while E. indica and E.
tristachya shared a considerable number of markers, indicating that t
hese three species form a close genetic assemblage within the Eleusine
. Eleusine floccifolia and E. compressa were found to be the most dive
rgent among the species examined. Comparison of RFLP, RAPD, and ISSR t
echnologies, in terms of the quantity and quality of data output, indi
cated that ISSRs are particularly promising for the analysis of plant
genome diversity.