At. Ung et al., STRUCTURE AND ANALYSIS OF HELICAL TUBULATE INCLUSION-COMPOUNDS FORMEDBY 2,6-DIMETHYLBICYCLO[3.3.1]NONANE-EXO-2,EXO-6-DIOL, Journal of the American Chemical Society, 117(34), 1995, pp. 8745-8756
The inclusion properties of 2,6-dimethylbicyclo [3.3.1]nonane-exo-2,ex
o-6-diol, 1, the prototype of the helical tubuland family of diol host
s, have been thoroughly investigated. These diols crystallize with a s
eries of spiral hydrogen bonded spines ...OH...OH...OH...OH... surroun
ding parallel canals. A total of 40 inclusion compounds of 1 (employin
g guests containing a wide range of functional group types) have been
characterized. These all crystallize in the chiral space group P3(1)21
(or its enantiomorph P3(2)21) with the guests trapped in the canals a
long c. The structures of 12 of these compounds have been determined b
y X-ray crystallographic methods, showing that the guests exert a stro
ng influence on the detailed structure of the resulting inclusion comp
ound. Increasing guest size can cause a large (4.8%) increase in the u
nit cell a (= b) length (canal width) accompanied by a small decrease
(0.96%) in c direction (canal length). This results in an 8.9% increas
e in unit cell volume and a dramatic 62% increase in canal cross-secti
onal area from 15.6 to 25.3 Angstrom(2) across the series of compounds
studied. The intermolecular adjustments which permit these changes ar
e examined in detail. Increases in hydrogen bonding distances, or alte
rations in the molecular bond lengths and angles exhibited by 1, are i
nsignificant factors. Rather it is the small changes in angles around
the hydrogen bonded spines, and the tilt angles of the diols with resp
ect to the canal axis, which are responsible. Considerable variation i
s observed in the types of interguest arrangement within the canals of
the 12 structures. These are explored and rationalized using crystal
engineering arguments, but, generally, weak host-guest interactions ar
e the most important intermolecular forces involved within the helical
canals. Exceptions to this are observed for guests substituted with h
alo groups. Samples of guest-free 1 still have the helical tubuland st
ructure unlike some other members of this diol family. Conclusive evid
ence for the existence of this lattice containing parallel empty canal
s each with an unobstructed cross-sectional area of about 15.6 Angstro
m(2) is presented.