In the methylotrophic yeast Hansenula polymorpha, approximately 25% of
all methanol-utilization-defective (Mut(-)) mutants are affected in g
enes required for peroxisome biogenesis (PER genes). Previously, we re
ported that one group of pel mutants, termed Pim(-), are characterized
by the presence of a few small peroxisomes with the bulk of peroxisom
al enzymes located in the cytosol. Here, we describe a second major gr
oup of pel mutants that were observed to be devoid of any peroxisome-l
ike structure (Per(-)). In each Per(-) mutant, the peroxisomal methano
l-pathway enzymes alcohol oxidase, catalase and dihydroxyacetone synth
ase were present and active but located in the cytosol. Together, the
Pim(-) and Per(-) mutant collections involved mutations in 14 differen
t PER genes. Two of the genes, PERS and PER7, were represented by both
dominant-negative and recessive alleles. Diploids resulting from cros
ses of dominant pel strains and wild-type H. polymorpha were Mut(-) an
d harbored peroxisomes with abnormal morphology. This is the first rep
ort of dominant-negative mutations affecting peroxisome biogenesis.