G. Flood et al., ASSOCIATION OF STRUCTURAL REPEATS IN THE ALPHA-ACTININ ROD DOMAIN - ALIGNMENT OF INTER-SUBUNIT INTERACTIONS, Journal of Molecular Biology, 252(2), 1995, pp. 227-234
Fragments of the rod domain of chicken a-actinin, which comprises four
spectrin-like repeat sequences, have been prepared by expression in E
scherichia coli. Electron microscopy reveals that all products contain
ing three or four complete repeats are rod-like. Self-association of f
ragments was detected by chemical cross-linking and analytical equilib
rium sedimentation. The intact rod domain forms a stable dimer, which
does not dissociate measurably in the accessible concentration range.
Elimination of either terminal repeat (repeat 1 or repeat 4) greatly d
iminishes the extent of dimerisation. The fragment comprising repeats
1-3 dimerises appreciably, with an association constant estimated from
the sedimentation equilibrium distribution of approximately 5 x 10(5)
M(-1). The fragment made up of repeats 2-4 dimerises to a small exten
t, but also forms aggregates at high concentrations. The results are m
ost easily reconciled with an aligned structure for the rod domain in
solution, in which repeat 1 associates with repeat 4 of the partnering
chain, and repeat 2 with repeat 3, rather than with a staggered struc
ture, in which one of the terminal repeats does not participate in dim
erisation. Possible explanations for the apparent difference observed
between the alpha-actinin rod structure in solution and in two-dimensi
onal crystalline arrays are examined. (C) 1995 Academic Press Limited