The knowledge-based expert computer system DEREK (Deductive Estimation
of Risk from Existing Knowledge) has been assessed for its potential
as a screen for predicting genotoxicity and carcinogenicity of some ch
emicals found in foods. This was achieved by establishing databases, s
ummarizing published activities of several chemical classes, including
aflatoxins, flavonols, hydroxylated anthraquinones and polycyclic aro
matic hydrocarbons (PAHs), to construct draft rules to identify struct
urally alerting toxicophores. This information was used, together with
other data (e.g. physicochemical properties, steric effects and molec
ular modelling), to produce a set of simplified, non-specific rules wh
ere possible to cover a wide spectrum of structures within each chemic
al class. Examples of toxicophores identified include: a bisfuranoid s
ubstructure centred around the 2,3-vinyl ether bond for aflatoxins and
a 6-bond substructure, based on the 'bay' region of phenanthrene, for
PAHs. The effects of various substituents and the presence of extra r
ings were considered. Operation of the rules is illustrated by referen
ce to these chemical groups, and to the favonols for which there are f
our on-screen messages, depending on hydroxylation at positions 3 and
5 on the fused ring system and on the phenyl appendage, and whether fu
rther hydroxylation can occur, for example by mixed function oxidase a
ctivity and/or chemical or metabolic release of masked hydroxyls. Rule
s were tested by processing a wide range of structurally related chemi
cals in each class, with known and unknown activities. In some cases,
key candidate structures for synthesis and toxicity testing were ident
ified. The results from such studies should facilitate rule improvemen
t. Whereas predictivity of a set of rules depends on the availability
of reliable, experimental toxicity data for as many potential molecule
s in a group as possible, utility for identifying toxic untested, nove
l structures may be enhanced by using physicochemical information. Exa
mples of this approach, as well as the advantages and current limitati
ons of DEREK, are presented and discussed. It is concluded that DEREK
has potential as a screen for genotoxicity and the approach adopted he
re for rule development may be useful for predicting other toxicity en
dpoints.