Lc. Webster et al., ALLOSTERIC REGULATION OF PROTON TRANSLOCATION BY A VACUOLAR ADENOSINE-TRIPHOSPHATASE, European journal of biochemistry, 232(2), 1995, pp. 586-595
The kinetics of nucleoside-triphosphate-dependent proton translocation
by a vacuolar-type adenosine-triphosphatase have been studied, using
the enzyme from bovine chromaffin-granule membranes, purified and reco
nstituted into proteoliposomes. The reaction was followed by recording
the quenching of the fluorescence of the permeant weak base 9-amino-6
-chloro-2-methoxyacridine I fluorescence data were collected and store
d in digital form, and the initial reaction rates estimated by linear
regression. In the absence of nucleoside diphosphate, the dependence o
f initial rates of proton translocation on substrate concentration wer
e fitted well by the Michaelis-Menten equation, as were the kinetics o
f ATP hydrolysis. ADP and other nucleoside diphosphates were potent in
hibitors of the ATPase, effecting a reduction in the maximum velocity
of the reaction, and producing sigmoid substrate-saturation curves whi
ch could be fitted by the empirical Hill equation, the Hill coefficien
t approaching 2 at high inhibitor concentrations, Data sets containing
initial-rate estimates were collected over a wide range of independen
tly varied concentrations of substrate and inhibitor and were modeled,
using rate equations derived from several different models based on t
he concerted-transition model of allosteric inhibition proposed by Mon
od, Wyman and Changeux. These equations were fitted to the data by wei
ghted non-lineal regression, using an iterative computer program to ob
tain the best estimates of kinetic parameters. One model consistently
fitted all of the data sets better than all the others, and this model
was based on the following assumptions: that the ATPase exists in two
conformational states, R and T; that only the R state is catalyticall
y active; that each state contains three kinetically equivalent cataly
tic sites, and one regulatory site; that nucleoside triphosphates bind
only to the catalytic sites, and that nucleoside diphosphates bind bo
th to the catalytic sites and to the regulatory site. The optimized va
lues of the kinetic parameters indicate that in the absence of nucleos
ide diphosphate, the enzyme is almost completely in the R state; that
nucleoside triphosphates bind more tightly to the R than to the T stat
e; that binding of nucleoside diphosphates to the regulatory site is v
ery tight, but occurs only in the T state; and that competitive bindin
g of nucleoside diphosphates at the catalytic sites is stronger in the
T state than in the R state. Experiments conducted with varying total
magnesium concentrations indicated that the magnesium complexes of nu
cleoside diphosphates are much stronger inhibitors than the free nucle
otides, and that free nucleoside triphosphates are weakly inhibitory,
probably competing with the magnesium complexes for binding at the cat
alytic sites. The results of these experiments indicate that the effec
ts of nucleoside diphosphates, particularly ABP, occur at concentratio
n ranges that are likely to be physiologically significant, and they m
ake predictions about ligand-induced conformation changes in the ATPas
e that can be tested by other means.