Pl. Dyal et al., USE OF THE PCR AND FLUORESCENT-PROBES TO RECOVER SSU RIBOSOMAL-RNA GENE-SEQUENCES FROM SINGLE CELLS OF THE CILIATE PROTOZOAN SPATHIDIUM, Molecular ecology, 4(4), 1995, pp. 499-503
A two-stage heminested PCR approach was developed to amplify small sub
unit (SSU) rDNA sequences, via two overlapping fragments, from single
cells of microbial eucaryotes. The method was evaluated using the cili
ate protozoon Spathidium when PCR products were obtained from nine of
10 cells tested. Southern blotting demonstrated that all fragments con
tained the same sequence in a region of SSU rDNA which is normally hig
hly variable between species. A fluorescent oligonucleotide probe was
used to demonstrate that this sequence also occurred in fixed cells of
Spathidium. Fixatives containing mercuric salts preserved cell shape
and allowed probe binding with little background autofluorescence. The
Spathidium sequence is closely related to that from the haptorid Homa
lozoon vermiculare.