THERMOSTATTED MOLECULAR-DYNAMICS - HOW TO AVOID THE TODA DEMON HIDDENIN NOSE-HOOVER DYNAMICS

Citation
Bl. Holian et al., THERMOSTATTED MOLECULAR-DYNAMICS - HOW TO AVOID THE TODA DEMON HIDDENIN NOSE-HOOVER DYNAMICS, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics, 52(3), 1995, pp. 2338-2347
Citations number
20
Categorie Soggetti
Physycs, Mathematical","Phsycs, Fluid & Plasmas
ISSN journal
1063651X
Volume
52
Issue
3
Year of publication
1995
Part
A
Pages
2338 - 2347
Database
ISI
SICI code
1063-651X(1995)52:3<2338:TM-HTA>2.0.ZU;2-V
Abstract
The Nose-Hoover thermostat, which is often used in the hope of modifyi ng molecular dynamics trajectories in order to achieve canonical-ensem ble averages, has hidden in it a Toda ''demon,'' which can give rise t o unwanted, noncanonical undulations in the instantaneous kinetic temp erature. We show how these long-lived oscillations arise from insuffic ient coupling of the thermostat to the atoms, and give straightforward , practical procedures for avoiding this weak-coupling pathology in is othermal molecular dynamics simulations.