DYNAMIC STRUCTURE OF A HIGHLY ORDERED BETA-SHEET MOLTEN GLOBULE - MULTIPLE CONFORMATIONS WITH A STABLE CORE

Citation
E. Barbar et al., DYNAMIC STRUCTURE OF A HIGHLY ORDERED BETA-SHEET MOLTEN GLOBULE - MULTIPLE CONFORMATIONS WITH A STABLE CORE, Biochemistry, 34(36), 1995, pp. 11423-11434
Citations number
64
Categorie Soggetti
Biology
Journal title
ISSN journal
00062960
Volume
34
Issue
36
Year of publication
1995
Pages
11423 - 11434
Database
ISI
SICI code
0006-2960(1995)34:36<11423:DSOAHO>2.0.ZU;2-Q
Abstract
The structure of [14-38](Abu), a variant of bovine pancreatic trypsin inhibitor (BPTI) with only the 14-38 disulfide bridge intact, has been analyzed by two-dimensional H-1 and H-1-N-15 NMR. Except for the 18-2 4, 29-35 antiparallel beta-sheet, residues in all regions of the molec ule give two exchange cross peaks for each H-1; for one residue, Gly 3 7, three exchange cross peaks are observed. The presence of exchange c ross peaks indicates that the residues sample conformations that inter convert on a time scale of milliseconds or longer. Over 90% of the NMR spectra have been assigned, including backbone and side chain atoms a nd their exchange cross peaks. Analyses of chemical shifts, chemical e xchange, hydrogen isotope exchange, and NOEs indicate that [14-38](Abu ) at pH 4.5 and 1 degrees C is an ensemble of interconverting conforma tions, in all of which the 18-24, 29-35 antiparallel beta-sheet is nat ive-like and intact. Outside the antiparallel beta-sheet, residues und ergo local order/disorder transitions. The stable structure of [14-38] Ab, is not in the vicinity of the 14-38 disulfide bond but rather is i n the slow-exchange core. NOE analysis indicates that the main tertiar y interactions involve hydrophobic contacts with the rings of Tyr 21, Tyr 23, and Tyr 35. As a model for early folding intermediates, the st ructure of [14-38](Abu) suggests that BPTI folding is initiated by sta bilization of a turn existing in the unfolded protein and involves bot h local and nonlocal hydrophobic interactions.