E. Barbar et al., DYNAMIC STRUCTURE OF A HIGHLY ORDERED BETA-SHEET MOLTEN GLOBULE - MULTIPLE CONFORMATIONS WITH A STABLE CORE, Biochemistry, 34(36), 1995, pp. 11423-11434
The structure of [14-38](Abu), a variant of bovine pancreatic trypsin
inhibitor (BPTI) with only the 14-38 disulfide bridge intact, has been
analyzed by two-dimensional H-1 and H-1-N-15 NMR. Except for the 18-2
4, 29-35 antiparallel beta-sheet, residues in all regions of the molec
ule give two exchange cross peaks for each H-1; for one residue, Gly 3
7, three exchange cross peaks are observed. The presence of exchange c
ross peaks indicates that the residues sample conformations that inter
convert on a time scale of milliseconds or longer. Over 90% of the NMR
spectra have been assigned, including backbone and side chain atoms a
nd their exchange cross peaks. Analyses of chemical shifts, chemical e
xchange, hydrogen isotope exchange, and NOEs indicate that [14-38](Abu
) at pH 4.5 and 1 degrees C is an ensemble of interconverting conforma
tions, in all of which the 18-24, 29-35 antiparallel beta-sheet is nat
ive-like and intact. Outside the antiparallel beta-sheet, residues und
ergo local order/disorder transitions. The stable structure of [14-38]
Ab, is not in the vicinity of the 14-38 disulfide bond but rather is i
n the slow-exchange core. NOE analysis indicates that the main tertiar
y interactions involve hydrophobic contacts with the rings of Tyr 21,
Tyr 23, and Tyr 35. As a model for early folding intermediates, the st
ructure of [14-38](Abu) suggests that BPTI folding is initiated by sta
bilization of a turn existing in the unfolded protein and involves bot
h local and nonlocal hydrophobic interactions.