Da. Rusakov et Mg. Stewart, QUANTIFICATION OF DENDRITIC SPINE POPULATIONS USING IMAGE-ANALYSIS AND A TILTING DISECTOR, Journal of neuroscience methods, 60(1-2), 1995, pp. 11-21
A series of image analysis routines, stochastic geometry methodology,
and a design-based stereological procedure have been developed to quan
tify objectively the length, layout, and the true density of neuronal
dendritic spines observed at the light (or confocal) microscope level.
First, the image of a dendritic fragment of interest (in the plane of
view) is scaled to a standard brightness scale, and the dendritic pro
file is separated from the background using a computerized thresholdin
g algorithm that analyzes the histogram of grey levels. Secondly, the
resulting binary image of the dendrite is transformed to a midline ske
leton that underlies the dendritic geometry. Thirdly, skeletal branch
lengths are directly computed (in pixels), thus giving objective measu
res of visible spine lengths and inter-spine distances along the dendr
itic stem. These raw data are the basis for (1) an estimation of the d
istribution of 3D spine lengths, and (2) a nearest neighbour analysis
of the spine layout along the dendrite. A design-based stereological r
outine, the tilting disector, is suggested for unbiased estimation of
the true (3D) density of spines along dendrites. The routine involves
tilting the dendritic fragment of interest around its longitudinal axi
s for a known angular sector and scoring the number of spines seen in
one angular position and unseen in the other position. Data from a stu
dy of neuronal dendrites in the chick forebrain are presented.