H. Moriuchi et al., HYDROPHOBIC CLUSTER-ANALYSIS PREDICTS AN AMINO-TERMINAL DOMAIN OF VARICELLA-ZOSTER VIRUS OPEN-READING-FRAME-10 REQUIRED FOR TRANSCRIPTIONALACTIVATION, Proceedings of the National Academy of Sciences of the United Statesof America, 92(20), 1995, pp. 9333-9337
Varicella-zoster virus open reading frame 10 (ORF10) protein, the homo
log of the herpes simplex virus protein VP16, fan transactivate immedi
ate-early promoters from both viruses. A protein sequence comparison p
rocedure termed hydrophobic cluster analysis was used to identify a mo
tif centered at Phe-28, near the amino terminus of ORF10, that strongl
y resembles the sequence of the activating domain surrounding Phe-442
of VP16. With a series of GAL4-ORF10 fusion proteins, we mapped the OR
F10 transcriptional-activation domain to the amino-terminal region (aa
5-79). Extensive mutagenesis of Phe-28 in GAL4-ORF10 fusion proteins
demonstrated the importance of an aromatic or bulky hydrophobic amino
acid at this position, as shown previously for Phe-442 of VP16. Transa
ctivation by the native ORF10 protein was abolished when Phe-28 was re
placed by Ala. Similar amino-terminal domains were identified in the V
P16 homologs of other alphaherpesviruses. Hydrophobic cluster analysis
correctly predicted activation domains of ORF10 and VP16 that share c
ritical characteristics of a distinctive subclass of acidic activation
domains.