N. Naber et al., A NOVEL ADENOSINE-TRIPHOSPHATE ANALOG WITH A HEAVY-ATOM TO TARGET THENUCLEOTIDE-BINDING SITE OF PROTEINS, Protein science, 4(9), 1995, pp. 1824-1831
We have synthesized 2'-deoxy-2'-iodoadenosine-5'-triphosphate (2'-IATP
), a heavy-atom analog of adenosine-5'-triphosphate. This compound was
made for X-ray structural studies to target the nucleotide site of AT
P binding proteins. It was diffused successfully into crystals of the
microtubule-based motor proteins ncd (non-claret disjunctional protein
from Drosophila melanogaster) and kinesin. With ncd, the nucleotide b
inding site was 70% occupied and the crystals were able to diffract X-
rays to 2.5 Angstrom. The iodo-analog provided a useful isomorphous de
rivative with overall phasing power 1.89 in the range of 25.0-2.5 Angs
trom. With kinesin, 2'-IATP co-crystallized with the protein. The crys
tals diffracted to at least 2.8 Angstrom with a phasing power of 1.73
in the range of 20.0-5.0 Angstrom. The analog was also found to be a s
ubstrate for all of the enzymes tested, including creatine kinase, pyr
uvate kinase, hexokinase, and myosin, with values of K-m and V-max tha
t were within a factor of 10 of those for ATP. The analog supported mu
scle contraction, relaxing fibers, and producing active tension with v
alues not statistically different from those obtained with ATP. These
results all suggest that this analog should be useful for providing a
heavy-atom derivative for crystals of enzymes that bind ATP.