Mu transposition is promoted by an extremely stable complex containing
a tetramer of the transposase (MuA) bound to the recombining DNA. Her
e we purify the Escherichia coli ClpX protein, a member of a family of
multimeric ATPases present in prokaryotes and eukaryotes (the Clp fam
ily), on the basis of its ability to remove the transposase from the D
NA after recombination. Previously, ClpX has been shown to function wi
th the ClpP peptidase in protein turnover. However, neither ClpP nor a
ny other protease is required for disassembly of the transposase. The
released MuA is not modified extensively, degraded, or irreversibly de
natured, and is able to perform another round of recombination in vitr
o. We conclude that ClpX catalyzes the ATP-dependent release of MuA by
promoting a transient conformational change in the protein and, there
fore, can be considered a molecular chaperone. ClpX is important at th
e transition between the recombination and DNA replication steps of tr
ansposition in vitro; this function probably corresponds to the essent
ial contribution of ClpX for Mu growth. Deletion analysis reveals that
the sequence at the carboxyl terminus of MuA is important for disasse
mbly by ClpX and can target MuA for degradation by ClpXP in vitro. The
se data contribute to the emerging picture that members of the Clp fam
ily are chaperones specifically suited for disaggregating proteins and
are able to function with or without a collaborating protease.