The low density lipoprotein (LDL) receptor is the prototype of a famil
y of structurally related cell surface receptors that mediate the endo
cytosis of multiple ligands in mammalian cells. Its ligand-binding dom
ain consists of seven cysteine-rich ligand-binding repeats, each simil
ar to 40 amino acid residues long. Ligand-binding repeats occur in oth
er members of the LDL receptor (LDLR) gene family and in a number of f
unctionally unrelated proteins. As a first step toward an understandin
g of the structure and function of LB repeats, we have expressed the a
mino-terminal ligand-binding repeat (LB1) of the human LDLR as a recom
binant peptide (rLB1) and have determined its disulfide-pairing scheme
. Oxidative folding of rLB1 yielded a single isomer which contained th
ree disulfide bonds. This isomer reacted with a conformation-specific
monoclonal antibody (IgG-C7) made to LB1 in the native LDLR, suggestin
g that rLB1 was correctly folded. rLB1 was resistant to digestion with
trypsin, chymotrypsin, and V8 protease, consistent with a tightly fol
ded structure. Disulfide bond connections were established using two s
eparate approaches. Digestion with the nonspecific proteolytic enzyme
proteinase K yielded an 8 amino acid peptide with a single disulfide b
ond which connected Cys(IV) and Cys(VI). In the second approach, disul
fide bonds were sequentially reduced with tris(2-carboxyethyl)phosphin
e and the resulting cysteine residues alkylated with iodoacetamide. An
analysis of peptides which contained two cysteinylacetamide residues,
derived from a single reduced disulfide bond, showed that Cys(I) and
Cys(III) were disulfide-bonded and confirmed the presence of a disulfi
de bond between Cys(IV) and Cys(VI). We infer that the remaining disul
fide bond bridges Cys(II) and Cys(V). These disulfide bonds result in
a cluster of negatively-charged residues, including the conserved Ser-
Asp-Glu sequence, in a single loop, in place for interactions with pos
itively charged residues on apoB-100 and apoE. The disulfide bond conn
ectivity of rLB1 1 serves as a paradigm for other members of the LB fa
mily.