We have isolated a clone corresponding to a new cold-regulated gene fr
om a cDNA library made from rapeseed (Brassica napus cv Samourai) cold
-acclimated etiolated seedlings. Sequence analysis and homology search
es showed that this clone encodes a protein highly homologous to the A
TP-dependent phosphoenolpyruvate carboxykinase (PEPCK; EC 4.1.1.49) fr
om Saccharomyces cerevisiae, Trypanosoma, Rhizobium sp., and Escherich
ia coli; we refer to the B. napus clone as BnPEPCK. A potential ATP-bi
nding site existing in all PEPCK proteins was also found in BnPEPCK. A
lthough there was a basal expression of BnPEPCK in seedlings grown at
control, room temperature, the steady-state level of the transcripts i
ncreased at 4 degrees C and decreased to normal levels when the seedli
ngs were returned to control temperature (22 degrees C). Using antibod
ies made against a recombinant histidine-BnPEPCK fusion protein, we de
monstrated that BnPEPCK protein level is correlated with the accumulat
ion of the BnPEPCK transcript.