Efficient replication of HIV-1 requires integration of a DNA copy of t
he viral genome into a chromosome of the host cell. Integration is cat
alyzed by the viral integrase, and we have previously reported that ph
enolic moieties in compounds such as flavones, caffeic acid phenethyl
ester (CAFE, 2), and curcumin confer inhibitory activity against HIV-1
integrase. We now extend these findings by performing a comprehensive
structure-activity relationship using CAPE analogues. Approximately 3
0 compounds have been prepared as HIV integrase inhibitors based on th
e structural lead provided by CAPE, which has previously been shown to
exhibit an IC50 value of 7 mu M in our integration assay. These analo
gues were designed to examine specific features of the parent CAFE str
ucture which may be important for activity. Among the features examine
d for their effects on inhibitory potency were ring substitution, side
chain length and composition, and phenyl ring conformational orientat
ion. In an assay which measured the combined effect of two sequential
steps, dinucleotide cleavage and strand transfer, several analogues ha
ve IC50 values for 3'-processing and strand transfer lower than those
of CAFE. Inhibition of strand transfer was assayed using both blunt-en
ded and ''precleaved'' DNA substrates. Disintegration using an integra
se mutant lacking the N-terminal zinc finger and C-terminal DNA-bindin
g domains was also inhibited by these analogues, suggesting that the b
inding site for these compounds resides in the central catalytic core.
Several CAFE analogues were also tested for selective activity agains
t transformed cells. Taken together, these results suggest that the de
velopment of novel antiviral agents for the treatment of acquired immu
ne deficiency syndrome can be based upon inhibition of HIV-1 integrase
.