COMMUNITY ANALYSIS BY BIOLOG - CURVE INTEGRATION FOR STATISTICAL-ANALYSIS OF ACTIVATED-SLUDGE MICROBIAL HABITATS

Citation
Jb. Guckert et al., COMMUNITY ANALYSIS BY BIOLOG - CURVE INTEGRATION FOR STATISTICAL-ANALYSIS OF ACTIVATED-SLUDGE MICROBIAL HABITATS, Journal of microbiological methods, 27(2-3), 1996, pp. 183-197
Citations number
22
Categorie Soggetti
Microbiology,"Biochemical Research Methods
ISSN journal
01677012
Volume
27
Issue
2-3
Year of publication
1996
Pages
183 - 197
Database
ISI
SICI code
0167-7012(1996)27:2-3<183:CABB-C>2.0.ZU;2-C
Abstract
Biolog MicroPlates are 96-well plates that contain pre-dried carbon so urces and a tetrazolium violet redox dye that turns purple if added mi croorganisms utilize the nutrients. We have measured absorbance change s due to tetrazolium dye response for microbial communities found in a ctivated sludge and laboratory models of these wastewater communities. To analyze the absorbance versus time data, we export and organize th e data into spreadsheets and use a trapezoidal approximation to determ ine the area under the absorbance versus time curve for each well. The Excel-based trapezoidal approximation has been shown to be in agreeme nt with a more complex curve fitting routine that used SAS to fit a lo g-logistic function to each curve, and then determined the area under each curve. This data analysis procedure has the advantage of collapsi ng the absorbance versus time curves down to a single value that integ rates information from the entire incubation period. This single value incorporates the lag phase, the rate of development and the extent of dye development for each well. The area under the curve is then used for statistical testing to compare individual carbon source utilizatio n, or in a multivariate pattern analysis of community metabolism of th e Biolog MicroPlate carbon sources. Examples of the use of this analys is are given for microbial communities of activated sludge and laborat ory models of activated sludge maintained with different types of feed stocks.