Using a positional cloning approach the major autosomal dominant polyc
ystic kidney disease (ADPKD) gene (PKD1) has been identified on chromo
some 16: a disease associated chromosome translocation was instrumenta
l in its identification. Study of the PKD1 gene has been complicated b
ecause most of the gene lies in a genomic region reiterated elsewhere
on the same chromosome. The duplicate area contains three genes which
share substantial homology with PKD1 and generate polyadenylated trans
cripts. Most PKD1 mutations have so far been detected in the single co
py, 3' end of the gene, but a group of patients with deletion of PKD1
and the adjacent TSC2 gene, which have severe infantile polycystic kid
ney disease, have also been characterised. The full length transcript
of PKD1 (similar to 14 kb) has now been cloned and is predicted to enc
ode a protein, polycystin, of 4302/3 aa. Polycystin contains multiple
extracellular domains including leucine rich repeats, a C-type lectin,
immunoglobulin and fibronectin type III-like domains and has a C term
inal region which is likely associated with the membrane. These homolo
gies indicate that polycystin is a cell-cell/ matrix interaction prote
in.